Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905685.1_cds_XP_016455948.1_49832
CDS Infomation

[gene=LOC107779958] [db_xref=GeneID:107779958] [protein=threonine dehydratase biosynthetic, chloroplastic-like] [protein_id=XP_016455948.1] [location=join(128180..128614,131483..131662,132726..133202,133623..133871,133973..134049,134181..134298,135084..135218,135326..135466)] [gbkey=CDS]
Sequence

ATGGCAGGTCTAATTTTCACCCCTGCAAACTCACTTTTTTCCCGCCCCAAATTCCCGGCG
AAAATATCAGCCATTACCGGCAATTACGACACCGTTAAAATCTCCACCGCCATGTCCAAA
ACGGCGGTGGAATTGTTTCCTAATTTACCGGCGACGGCCGTAGATACATTGACAATCAAA
GTTTCACCACCATCTCCTCCTCCTCCGACTCCATTGCTAGTAGTTTCTCCGAATTCGTTA
CGGTGTGAGCCTGGGTACTTGATACCGAATTATCCGGTGGGCGGTAATGGAGGTGAGAAC
GGGTTTCAGTATCTAGTGGATATATTGGGTACGAAAGTGTACGATGTAGCAAATGAATCG
CCATTGCAGCTTGCGCCGAAGCTTTCACAGAAGTTGGGGGTTAACGTTTGGCTTAAACGA
GAGGATCTTCAACCCGTCTTCTCATTCAAGCTTAGAGGAGCATACAATATGATGGTCAAT
CTCTCCCAAGAGCAGCTGAAAAGAGGGGTCATATGCTCATCAGCTGGGAATCACGCGCAA
GGCGTCGCATTAGCTGCTCAAAGACTTGGCTGCAATGCTGTCATTGGGATGCCTGTTACT
ACACCAGAGATTAAGTGGAAATCAGTAAAGAGATTGGGTGCTGATGTTGTTCTTGTGGGG
GACGCGTATGATGAAGCTCAAGCATACGCCAAAAAGAGGGCTGAAGAGGAAGGCCGCATC
TTCATCCCTCCTTTTGATCATCCAGATATCATCGTAGGGCAAGGTACTATCGGTATGGAG
ATTAATAACCAACTCAAAGATAAAATACACGCGATATTTGTGCCTGTTGGTGGAGGTGGT
CTTATAGCTGGTATTGCTGCCTATATGAAAAGAGTTGCCCCTCATATAAAGATTATTGGA
GTTGAGCCATCTGATGCAAATGCGATGGCATTGTCATTACACTATGGTCAGAGAGTAATG
CTAGACCAAGTCGGACGTTTTGCAGATGGTGTAGCTGTTAAAGTGGTTGGCGAAGAAACT
TTCCGTCTTTGTAAGGAATTAATAGATGGCGTGGTCCTAGTTAATCGCGATGCTATATGT
GCATCGATAAAGGACATGTTTGAAGAGAAACGGAGCATATTAGAGCCTGCAGGTGCACTT
GCTCTAGCCGGAGCTGAAGCATACTGCAAATACTATGGCCTAAAGGATGAAAACGTCATA
GCAATAACAAGTGGAGCTAATATGAACTTTGATAGACTAAGATTGATAAGCGAACTCGCA
GATGTTGGTAGAAAGCGGGAAGCTGTGCTCGTTACTTTTATGCCAGAAGAGCCGGGAAGC
TTCAAACGGTTCTGTGAACAGGTCGGAACAACAATGAAATTTACTGAAGTTAAGTACAGA
TATAATTCTGGCAATGAAAAAGCTCAAGTTCTTTACAGTGTTGGTATTCAAACTGAATCA
GAACCTGAATCTCTGATGGAGAGGCTGAAATCAGTACAATTGCATACTGTTAATCTTACG
GAGAATGACTTGGTCAAAGATCATTTGAGGCATTTGATGGGTGGTAGATCAAATCTTCAC
AATGAGCTTCTTTGTCGATTCACTTTTCCGGAGAAGCCTGGTGCTTTATTGAAGTTTTTA
GATACTTTCAGCCCGCGTTGGAATATAAGTTTGATCCATTATCGCGGACAGGGACAAATT
GGTGCAAATGTTTTAGTTGGGATACAAGTTCCAGAGGCTGAGTTTGATGAGTTCCAGGGT
CGAGCTGCCAATCTTGGTTATGAATATGTGGTGGAGAGTCTAAATGATGCTTTCAAGCTT
ATAATGCATTGA

Peptide Sequence

PEP ID

XP_016455948.1
PEP Infomation

PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Nicotiana tabacum]
Sequence

MAGLIFTPANSLFSRPKFPAKISAITGNYDTVKISTAMSKTAVELFPNLPATAVDTLTIK
VSPPSPPPPTPLLVVSPNSLRCEPGYLIPNYPVGGNGGENGFQYLVDILGTKVYDVANES
PLQLAPKLSQKLGVNVWLKREDLQPVFSFKLRGAYNMMVNLSQEQLKRGVICSSAGNHAQ
GVALAAQRLGCNAVIGMPVTTPEIKWKSVKRLGADVVLVGDAYDEAQAYAKKRAEEEGRI
FIPPFDHPDIIVGQGTIGMEINNQLKDKIHAIFVPVGGGGLIAGIAAYMKRVAPHIKIIG
VEPSDANAMALSLHYGQRVMLDQVGRFADGVAVKVVGEETFRLCKELIDGVVLVNRDAIC
ASIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKDENVIAITSGANMNFDRLRLISELA
DVGRKREAVLVTFMPEEPGSFKRFCEQVGTTMKFTEVKYRYNSGNEKAQVLYSVGIQTES
EPESLMERLKSVQLHTVNLTENDLVKDHLRHLMGGRSNLHNELLCRFTFPEKPGALLKFL
DTFSPRWNISLIHYRGQGQIGANVLVGIQVPEAEFDEFQGRAANLGYEYVVESLNDAFKL
IMH

Transcript Sequence

Gene sequence data has not been registered.